Institutions
|
About Us
|
Help
|
Gaeilge
0
1000
Home
Browse
Advanced Search
Search History
Marked List
Statistics
A
A
A
Show search options
Hide search options
Search using:
All
Any
None of these
Exact Phrase
in
Keyword (All Fields)
Title
Author
Subject
Institution
Funder
All
Any
None of these
Exact Phrase
in
Keyword (All Fields)
Title
Author
Subject
Institution
Funder
All
Any
None of these
Exact Phrase
in
Keyword (All Fields)
Title
Author
Subject
Institution
Funder
From
2013
2012
2011
2010
2009
2008
2007
2006
2005
2004
2003
2002
2001
2000
1999
1998
1997
1996
1995
1994
1993
1992
1991
1990
1989
1988
1987
1986
1985
1984
1983
1982
1981
1980
1979
1978
1977
1976
1975
1974
1973
1972
1971
1970
1969
1968
1967
1966
1965
1964
1963
1962
1961
1960
1959
1958
1957
1956
1955
1954
1953
1952
1951
1950
1949
1948
1947
1946
1944
1943
1942
1941
1940
1939
1938
1937
1936
1935
1934
1933
1932
1931
1930
1929
1928
1927
1925
1923
1920
1919
1917
1915
1914
1913
1912
1911
1909
1908
1907
1906
1905
1904
1903
1902
1901
1900
1899
1898
1897
1896
1895
1894
1893
1892
1891
1890
1889
1888
1887
1886
1885
1884
1883
1882
1881
1880
1879
1878
1877
1876
1875
1874
1873
1872
1871
1870
1869
1867
1866
1865
1864
1862
1861
1859
1858
1857
1856
1855
1854
1853
1852
1851
1849
To
2013
2012
2011
2010
2009
2008
2007
2006
2005
2004
2003
2002
2001
2000
1999
1998
1997
1996
1995
1994
1993
1992
1991
1990
1989
1988
1987
1986
1985
1984
1983
1982
1981
1980
1979
1978
1977
1976
1975
1974
1973
1972
1971
1970
1969
1968
1967
1966
1965
1964
1963
1962
1961
1960
1959
1958
1957
1956
1955
1954
1953
1952
1951
1950
1949
1948
1947
1946
1944
1943
1942
1941
1940
1939
1938
1937
1936
1935
1934
1933
1932
1931
1930
1929
1928
1927
1925
1923
1920
1919
1917
1915
1914
1913
1912
1911
1909
1908
1907
1906
1905
1904
1903
1902
1901
1900
1899
1898
1897
1896
1895
1894
1893
1892
1891
1890
1889
1888
1887
1886
1885
1884
1883
1882
1881
1880
1879
1878
1877
1876
1875
1874
1873
1872
1871
1870
1869
1867
1866
1865
1864
1862
1861
1859
1858
1857
1856
1855
1854
1853
1852
1851
1849
Optionally, filter by:
(Leave unchecked to search all fields)
Item Type
Book
Book chapter
Conference item
Contribution to newspaper/magazine
Doctoral thesis
Journal article
Master thesis (research)
Master thesis (taught)
Multimedia
Patent
Report
Review
Working paper
Other
Peer Review Status
Peer reviewed
Non peer reviewed
Unknown
Institution
Dublin City University
Dublin Institute of Technology
NUI Galway
NUI Maynooth
Trinity College Dublin
University College Cork
University College Dublin
University of Limerick
Funder
Enterprise Ireland (EI)
Environmental Protection Agency (EPA)
Health Research Board (HRB)
Higher Education Authority (HEA)
Irish Aid
Irish Research Council for Humanities and Social Sciences (IRCHSS)
Irish Research Council for Science Engineering and Technology (IRCSET)
Marine Institute
Science Foundation Ireland (SFI)
Teagasc
Language
Irish
English
Danish
French
German
Interlingue; Occidental
Italian
Japanese
Spanish; Castilian
Current Search:
'Biology' in all fields;
614 items found
Sort by
Relevance
Title
Author
Item type
Date
Institution
Peer review status
Language
Order
Ascending
Descending
25
50
100
per page
1
2
3
4
5
6
7
8
9
10
Bibtex
CSV
EndNote
RefWorks
RIS
XML
Displaying Results 76 - 100 of 614 on page 4 of 25
Marked
Mark
Regulated Expression of Adenoviral Vectors-Based Gene Therapies: Therapeutic Expression of Toxins and Immune-Modulators
(2008)
Curtin, James; Candolfi, Marianela; Puntel, Mariana; Xiong, Weidong; Muhammad, AKM Ghul...
Regulated Expression of Adenoviral Vectors-Based Gene Therapies: Therapeutic Expression of Toxins and Immune-Modulators
(2008)
Curtin, James; Candolfi, Marianela; Puntel, Mariana; Xiong, Weidong; Muhammad, AKM Ghulam; Kroeger, Kurt; Mondkar, Sonali; Liu, Chunyan; Bondale, Niyati; Lowenstein, Pedro; Castro, Maria
Abstract:
Regulatable promoter systems allow gene expression to be tightly controlled in vivo. This is highly desirable for the development of safe, efficacious adenoviral vectors that can be used to treat human diseases in the clinic. Ideally, regulatable cassettes should have minimal gene expression in the "OFF" state, and expression should quickly reach therapeutic levels in the "ON" state. In addition, the components of regulatable cassettes should be non-toxic at physiological concentrations and should not be immunogenic, especially when treating chronic illness that requires long-lasting gene expression. In this chapter, we will describe in detail protocols to develop and validate first generation (Ad) and high-capacity adenoviral (HC-Ad) vectors that express therapeutic genes under the control of the TetON regulatable system. Our laboratory has successfully used these protocols to regulate the expression of marker genes, immune stimulatory genes, and toxins for canc...
http://arrow.dit.ie/scschbioart/31
Marked
Mark
Live and let die: regulatory mechanisms in Fas-mediated apoptosis
(2003)
Curtin, James; Cotter, Thomas
Live and let die: regulatory mechanisms in Fas-mediated apoptosis
(2003)
Curtin, James; Cotter, Thomas
Abstract:
Activation of Fas receptor by Fas ligand causes caspase 8 activation and apoptosis in cells and is an important mechanism by which normal tissue homeostasis and function are maintained. Activation of caspase 8 is preceded by the formation of a death-inducing signalling complex (DISC), and a number of redundant mechanisms regulate DISC formation in vivo. Fas receptor is widely expressed in tissues, and dysfunction of the regulatory mechanisms in Fas receptor signalling has been reported in several diseases including autoimmune disease and cancer. This review aims to identify and discuss the various mechanisms employed by cells to alter their sensitivity to Fas-mediated apoptosis by regulating DISC formation. We also discuss a number of defects identified with Fas receptor signalling and the associated pathologies.
http://arrow.dit.ie/scschbioart/35
Marked
Mark
Transcriptional regulation of cholesterol 24-hydroxylase by histone deacetylase inhibitors.
(2009)
Shafaati, Marjan; O'Driscoll, Riona; Bjorkhem, Ingemar; Meaney, Steve
Transcriptional regulation of cholesterol 24-hydroxylase by histone deacetylase inhibitors.
(2009)
Shafaati, Marjan; O'Driscoll, Riona; Bjorkhem, Ingemar; Meaney, Steve
Abstract:
The mechanistic basis for the tissue specific expression of cholesterol elimination pathways is poorly understood. To gain additional insight into this phenomenon we considered it of interest to investigate if epigenetic mechanisms are involved in the regulation of the brain-specific enzyme cholesterol 24-hydroxylase (CYP46A1), a key regulator of brain cholesterol elimination. We demonstrated a marked time-dependent derepression of the expression of CYP46A1, in response to treatment with the potent histone deacetylase (HDAC) inhibitor Trichostatin A. The pattern of expression of the genes in the genomic region surrounding CYP46A1 was found to be diametrically opposite in brain and liver. Intraperitoneal injection of HDAC inhibitors in mice led to a significant derepression of hepatic Cyp46a1 mRNA expression and tissue specific changes in Hmgcr and Cyp39a1 mRNA expression. These results are discussed in the context of the phenomenology of tissue specific cholesterol balance.
http://arrow.dit.ie/scschbioart/49
Marked
Mark
JNK Regulates HIPK3 Expression and Promotes Resistance to Fas-mediated Apoptosis in DU 145 Prostate Carcinoma Cells
(2004)
Curtin, James; Cotter, Thomas
JNK Regulates HIPK3 Expression and Promotes Resistance to Fas-mediated Apoptosis in DU 145 Prostate Carcinoma Cells
(2004)
Curtin, James; Cotter, Thomas
Abstract:
Elevated endogenous JNK activity and resistance to Fas receptor-mediated apoptosis have recently been implicated in progression of prostate cancer and can promote resistance to apoptosis in response to chemotherapeutic drugs. In addition, JNK has been demonstrated to promote transformation of epithelial cells by increasing both proliferation and survival. Although numerous studies have reported a role for JNK in promoting Fas receptor-mediated apoptosis, there is a paucity in the literature studying the antiapoptotic function of JNK during Fas receptor-mediated apoptosis. Consequently, we have used the recently described specific JNK inhibitor SP600125 and RNA interference to inhibit endogenous JNK activity in the prostate carcinoma cell line DU 145. We demonstrated that endogenous JNK activity increased the expression of a kinase, HIPK3, that has previously been implicated in multidrug resistance in a number of tumors. HIPK3 has also been reported to phosphorylate FADD. The interac...
http://arrow.dit.ie/scschbioart/33
Marked
Mark
Defects in death-inducing signalling complex formation prevent JNK activation and Fas-mediated apoptosis in DU 145 prostate carcinoma cells
(2003)
Curtin, James; Cotter, Thomas
Defects in death-inducing signalling complex formation prevent JNK activation and Fas-mediated apoptosis in DU 145 prostate carcinoma cells
(2003)
Curtin, James; Cotter, Thomas
Abstract:
Androgen-independent prostate carcinomas are resistant to chemotherapy and cell lines derived from androgen-independent prostate carcinomas such as DU 145 cells are highly resistant to Fas-mediated apoptosis. The incubation of DU 145 cells with anti-Fas IgM agonistic antibody of Fas receptor fails to activate JNK, a stress kinase involved in regulating apoptosis. We have previously shown that JNK activation is sufficient and necessary to promote Fas-mediated apoptosis in DU 145 cells. We investigate the mechanisms by which JNK activation and apoptosis are abrogated. HSP27 is overexpressed in DU 145 cells and has previously been reported to sequester DAXX and prevent JNK activation in cells treated with anti-Fas IgM. However, we find no evidence that HSP27 interacts with DAXX in DU 145 cells. Instead, we find that FADD does not interact with caspase-8 and this results in defective death-inducing signalling complex formation following Fas receptor activation.
http://arrow.dit.ie/scschbioart/36
Marked
Mark
Study of the Efficacy, Biodistribution, and Safety Profile of Therapeutic Gutless Adenovirus Vectors as a Prelude to a Phase I Clinical Trial for Glioblastoma
(2010)
Muhammad, AKM Ghulam; Puntel, Mariana; Candolfi, Marianela; Salem, A; Yagiz, Kader; Far...
Study of the Efficacy, Biodistribution, and Safety Profile of Therapeutic Gutless Adenovirus Vectors as a Prelude to a Phase I Clinical Trial for Glioblastoma
(2010)
Muhammad, AKM Ghulam; Puntel, Mariana; Candolfi, Marianela; Salem, A; Yagiz, Kader; Farrokhi, C; Kroeger, Kurt M; Xiong, Weidong; Curtin, James; Liu, Chunyan; Lawrence, K; Bondale, Niyati; Lerner, Jonathan; Baker, G; Foulad, David; Pechnick, Robert; Palmer, Donna; Ng, Philip; Lowenstein, Pedro; Castro, Maria
Abstract:
Glioblastoma multiforme (GBM) is the most common and most aggressive primary brain tumor in humans. Systemic immunity against gene therapy vectors has been shown to hamper therapeutic efficacy; however, helper-dependent high-capacity adenovirus (HC-Ad) vectors elicit sustained transgene expression, even in the presence of systemic anti-adenoviral immunity. We engineered HC-Ads encoding the conditional cytotoxic herpes simplex type 1 thymidine kinase (TK) and the immunostimulatory cytokine fms-like tyrosine kinase ligand 3 (Flt3L). Flt3L expression is under the control of the regulatable Tet-ON system. In anticipation of a phase I clinical trial for GBM, we assessed the therapeutic efficacy, biodistribution, and clinical and neurotoxicity with escalating doses of HC-Ad-TetOn-Flt3L + HC-Ad-TK in rats. Intratumoral administration of these therapeutic HC-Ads in rats bearing large intracranial GBMs led to long-term survival in ~70% of the animals and development of antiglioma immunologic...
http://arrow.dit.ie/scschbioart/53
Marked
Mark
Novel Gene Therapeutic Approaches to Brain Cancer
(2006)
Castro, Maria; Curtin, James; King, Gwendalyn; Candolfi, Marianela; Czer, Peter; Sciasc...
Novel Gene Therapeutic Approaches to Brain Cancer
(2006)
Castro, Maria; Curtin, James; King, Gwendalyn; Candolfi, Marianela; Czer, Peter; Sciascia, Sandra; Kroeger, Kurt; Fakhouri, Tamer; Honig, Sarah; Kuoy, William; Kang, Terry; Johnson, Stephen; Lowenstein, Pedro
Abstract:
Gene Therapy for Neurological Disorders Chapter 13 ISBN-10 : 0-8247-2847-5( Hardcover) ISBN-13: 978-0-8247-2847-2(Hardcover)
In the United States, approximately 17,000 people per year are diagnosed with brain tumors, the leading cause of death from cancers in children ages 1-15 year (1,2). Gliomas are the most prevalent type of brain tumors in adults, affecting 3.2/100,000 persons/yr in the United States (www.CBTRUS.org). In spite of advances in surgery, chemotherapy, and radiotherapy, the mean survival time of patients post-diagnosis remains approximately 9-12 months.
http://arrow.dit.ie/scschbiobk/2
Marked
Mark
Regulatable Gene Expression Systems for Gene Therapy Applications: Progress and Future Challenges
(2005)
Goverdhana, Shyam; Puntel, Mariana; Xiong, Weidong; Zirger, Jeffrey; Barcia, Carlos; Cu...
Regulatable Gene Expression Systems for Gene Therapy Applications: Progress and Future Challenges
(2005)
Goverdhana, Shyam; Puntel, Mariana; Xiong, Weidong; Zirger, Jeffrey; Barcia, Carlos; Curtin, James; Soffer, Eric; Mondkar, Sonali; King, Gwendalyn; Hu, Jinwei; Candolfi, Marianela; Greengold, Diane; Lowenstein, Pedro; Castro, Maria
Abstract:
Gene therapy aims to revert diseased phenotypes by the use of both viral and nonviral gene delivery systems. Substantial progress has been made in making gene transfer vehicles more efficient, less toxic, and nonimmunogenic and in allowing long-term transgene expression. One of the key issues in successfully implementing gene therapies in the clinical setting is to be able to regulate gene expression very tightly and consistently as and when it is needed. The regulation ought to be achievable using a compound that should be nontoxic, be able to penetrate into the desired target tissue or organ, and have a half-life of a few hours (as opposed to minutes or days) so that when withdrawn or added (depending on the regulatable system used) gene expression can be turned “on” or “off” quickly and effectively. Also, the genetic switches employed should ideally be nonimmunogenic in the host. The ability to switch transgenes on and off would be of paramount importance not only when the therap...
http://arrow.dit.ie/scschbioart/56
Marked
Mark
In vivo mature immunological synapses forming SMACs mediate clearance of virally infected astrocytes from the brain
(2006)
Barcia, Carlos; Thomas, Clare; Curtin, James; King, Gwendalyn; Wawrowsky, Kolja; Candol...
In vivo mature immunological synapses forming SMACs mediate clearance of virally infected astrocytes from the brain
(2006)
Barcia, Carlos; Thomas, Clare; Curtin, James; King, Gwendalyn; Wawrowsky, Kolja; Candolfi, Marianela; Xiong, Weidong; Liu, Chunyan; Kroeger, Kurt; Boyer, Olivier; Kupiec-Weglinski, Jerzy; Klatzmann, David; Castro, Maria; Lowenstein, Pedro
Abstract:
The microanatomy of immune clearance of infected brain cells remains poorly understood. Immunological synapses are essential anatomical structures that channel information exchanges between T cell–antigen-presenting cells (APC) during the priming and effector phases of T cells' function, and during natural killer–target cell interactions. The hallmark of immunological synapses established by T cells is the formation of the supramolecular activation clusters (SMACs), in which adhesion molecules such as leukocyte function-associated antigen 1 segregate to the peripheral domain of the immunological synapse (p-SMAC), which surrounds the T cell receptor–rich or central SMAC (c-SMAC). The inability so far to detect SMAC formation in vivo has cast doubts on its functional relevance. Herein, we demonstrate that the in vivo formation of SMAC at immunological synapses between effector CD8+ T cells and target cells precedes and mediates clearance of virally infected brain astrocytes.
http://arrow.dit.ie/scschbioart/55
Marked
Mark
Investigation of response and resistance to dasatinib in melanoma cell lines
(2010)
Eustace, Alexander J
Investigation of response and resistance to dasatinib in melanoma cell lines
(2010)
Eustace, Alexander J
http://doras.dcu.ie/15432/
Marked
Mark
Development and Validation of a Novel Reporter Assay for Human Papillomavirus Type 16 Late Gene Expression
(2012)
Orru, Beatrice; Cunniffe, Ciaran; Ryan, Fergus X.; Schwartz, Stefan
Development and Validation of a Novel Reporter Assay for Human Papillomavirus Type 16 Late Gene Expression
(2012)
Orru, Beatrice; Cunniffe, Ciaran; Ryan, Fergus X.; Schwartz, Stefan
Abstract:
<p>To facilitate the investigations of HPV-16 late gene expression HPV-16 reporter plasmids were generated using previously described sub-genomic HPV-16 plasmids, named pBEL and pBELM, that, similar to the full viral genome, produce primarily HPV-16 early mRNAs and very little, if any, late mRNAs in cervical cancer cells. The HPV-16 late L1 gene was replaced by the chloramphenicol acetyltransferase (CAT) reporter gene, or green fluorescent protein (GFP), preceded by the poliovirus internal ribosome entry site (IRES). Results show that the reporter genes mimic the expression of L1 from these plasmids. For example, overexpression of adenovirus E4orf4 protein (E4orf4), polypyrimidine tract binding protein (PTB), arginine/serinerich SRp30c protein (SRp30c) or alternative splicing factor/splicing factor 2 (ASF/SF2) induced an increased expression of CAT or GFP. Stable cell lines with reporter plasmids pBELCAT and pBELMCAT were also generated. An induction of CAT was observed in HPV...
http://arrow.dit.ie/scschbioart/79
Marked
Mark
MultiPhyl: a high-throughput phylogenomics webserver using distributed computing
(2007)
Keane, Thomas M.; Naughton, Thomas J.; McInerney, James O.
MultiPhyl: a high-throughput phylogenomics webserver using distributed computing
(2007)
Keane, Thomas M.; Naughton, Thomas J.; McInerney, James O.
Abstract:
With the number of fully sequenced genomes increasing steadily, there is greater interest in performing large-scale phylogenomic analyses from large numbers of individual gene families. Maximum likelihood (ML) has been shown repeatedly to be one of the most accurate methods for phylogenetic construction. Recently, there have been a number of algorithmic improvements in maximum-likelihood-based tree search methods. However, it can still take a long time to analyse the evolutionary history of many gene families using a single computer. Distributed computing refers to a method of combining the computing power of multiple computers in order to perform some larger overall calculation. In this article, we present the first high-throughput implementation of a distributed phylogenetics platform, MultiPhyl, capable of using the idle computational resources of many heterogeneous non-dedicated machines to form a phylogenetics supercomputer. MultiPhyl allows a user to upload hundreds or thousan...
http://eprints.nuim.ie/1304/
Marked
Mark
Autocatalytic closure and the evolution of cellular information processing networks
(2009)
Decraene, James
Autocatalytic closure and the evolution of cellular information processing networks
(2009)
Decraene, James
Abstract:
Cellular Information Processing Networks (CIPNs) are chemical networks of interacting molecules occurring in living cells. Through complex molecular interactions, CIPNs are able to coordinate critical cellular activities in response to internal and external stimuli. We hypothesise that CIPNs may be abstractly regarded as subsets of collectively autocatalytic (i.e., organisationally closed) reaction networks. These closure properties would subsequently interact with the evolution and adaptation of CIPNs capable of distinct information processing abilities. This hypothesis is motivated by the fact that CIPNs may require a mechanism enabling the self-maintenance of core components of the network when subjected to internal and external perturbations and during cellular divisions. Indeed, partially replicated or defective CIPNs may lead to the malfunctioning and premature death of the cell. In this thesis, we evaluate different existing computational approaches to model and evolve chemi...
http://doras.dcu.ie/14810/
Marked
Mark
Chimerism in a marine protochordate
(2002)
Sommerfeldt, Anna Dorothea, (Thesis)
Chimerism in a marine protochordate
(2002)
Sommerfeldt, Anna Dorothea, (Thesis)
Abstract:
<p>Many marine invertebrates bud vegetatively to produce a modular colony of individuals derived from a single zygote. Fusion of different colonies to produce a genetically composite entity (a chimera) is known from experiements on sponges, hydroids, corals, bryozoans and ascidians-groups which together dominate sessile faunas on marine hard substrates. In this study the fusion behaviour of the colonial ascidian Diplosoma literianum (Milne Edwards) has been investigate. Laboratory experiments were undertaken to assess the influence of relatedness on fusion behaviour in young and adult colonies. The degree of relatedness had a slight effect on the fusion behaviour; nevertheless unrelated colonies fused with a frequency of 15%. These fusion trials were conducted using colonies from the same population and form geographically distant populations. In addition chimeric associations between unrelated colonies were shown to remain stable for over 15 months. The presence and extent of...
http://arrow.dit.ie/sciendoc/26
Marked
Mark
The role of b2-glycoprotein I in homeostatis
(2007)
Lin, Frederic, (Thesis)
The role of b2-glycoprotein I in homeostatis
(2007)
Lin, Frederic, (Thesis)
Abstract:
<p>B2-glycoprotein I (B2GPI) is a phospholipid-binding protein of 326 amino acids found in plasma at a concentration of approx. 180 ug/ml. It has a sequence of positively charged amino acids located at the carboxy terminus that mediates anionic phospholipid binding. B2GPI is suspected to have a role in inhibition of thrombosis. This suspicion is reinforced by the observation that B2GPI is the major target for autoantibodies in the antiphospholipid syndrome. However, little is known about circulating levels of the protein in common thrombotic diseases of inflammation. In the first part of this thesis, we developed a sensitive sandwich-direct ELISA for B2GPI quantification and measured serum B2GPI level in 344 healthy controls, 73 women with uncomplicated pregnancies, 102 patients with non-haemorrhagic stroke, 121 patients with acute coronary syndrome and 200 patients with elevated C-reactive protein (CRP) suffering from a variety of inflammatory disorders. In healthy individual...
http://arrow.dit.ie/sciendoc/6
Marked
Mark
Iron, folate and vitamin B12 status of apparently healthy Irish adult women attending general practitioners in inner-city Dublin
(2002)
Casey, Helen R., (Thesis)
Iron, folate and vitamin B12 status of apparently healthy Irish adult women attending general practitioners in inner-city Dublin
(2002)
Casey, Helen R., (Thesis)
Abstract:
<p>There is substantial related morbidity and mortality among men and women in developed countries. Certain events during the course of a woman’s life such as menstruation, pregnancy, lactation and the menopause may compromise haematinic nutrient status. The purpose of this study was to investigate iron, folate and vitamin B12 status among a sample of apparently healthy, non-pregnant Irish adult women attending general practitioners in inner-city Dublin. Dietary, socio-economic, medical and lifestyle factors contributing to status of these haematinic nutrients were extensively examined. The initial part of the work validated the methods in a representative sample of inner city Dublin women (n=35, mean age 40.3 years, SD 5.5 years). The Food Intake Questionnaire was developed and validated against the Diet History and biomarkers of haematinic nutrients in blood samples. An “Interview Questionnaire” was also developed and tested for reliability. The main study examined iron, fol...
http://arrow.dit.ie/sciendoc/10
Marked
Mark
Dynamic Ontology Lifecycle Scenario in Translational Medicine
(2007)
Novacek, Vit; Handschuh, Siegfried
Dynamic Ontology Lifecycle Scenario in Translational Medicine
(2007)
Novacek, Vit; Handschuh, Siegfried
Abstract:
In this paper, we present a healthcare¿oriented vision of dynamic ontology lifecycle that has been recently developed within Knowledge Web ¿ EU Network of Excellence aimed at transition of Semantic Web technologies to industry. The core contribution of this paper is the proposal of methodologically and technically integral ontology lifecycle scenario, provided with extensive use case from the domain of translational medicine, showing the forthcoming impact on the biomedicine industry.
http://hdl.handle.net/10379/494
Marked
Mark
Development of an In Vitro Assay to predict patient response to radiotheraphy
(1995)
Sheridan, Mary, (Thesis)
Development of an In Vitro Assay to predict patient response to radiotheraphy
(1995)
Sheridan, Mary, (Thesis)
Abstract:
<p>At the present time, the treatment plan for a patient with cancer is usually based on parameters such as tumour site, histological type, and tumour stage and performance status. However, it is well know that the radiosensitivity of human cancers varies widely from one patient to another (Fertil et al., 1981), and that even within these broad categories some tumours will show greater response to radiotherapy than others. If those patients unlikely to be cured by radiotherapy could be identified prior to commencement of treatment, alternative or more aggressive therapies might be selected which may give a better chance of cure than the standard therapy. The aim of this study was to develop an in vitro essay, the Mothersill outgrowth assay, to predict the individual patient response to chemo – and, in particular, radiotherapy. This assay involves culturing explants cut from a tumour and then treating them in situ with clinical equivalent doses of chemo- and radiotherapy. Two t...
http://arrow.dit.ie/sciendoc/77
Marked
Mark
Hypoxia helps glioma to fight therapy
(2009)
Amberger-Murphy, Verena
Hypoxia helps glioma to fight therapy
(2009)
Amberger-Murphy, Verena
Abstract:
Despite major improvements in the surgical management the prognosis for patients bearing malignant gliomas is still dismal. Malignant gliomas are notoriously resistant to treatment and the survival time of patients is between 3-8 years for low-grade and anaplastic gliomas and 6 - 12 month for glioblastoma. Increasing malignancy of gliomas correlates with an increase in cellularity and a poorly organized tumour vasculature leading to insufficient blood supply, hypoxic areas and ultimately to the formation of necrosis, a characteristic of glioblastoma. Hypoxic/necrotic tumours are more resistant to chemotherapy and radiation. Hypoxia induces either directly or indirectly (through the activation of transcription factors) changes in the biology of a tumour and its microenvironment leading to increased aggressiveness and tumour resistance to chemotherapy and radiation. This review is focused on hypoxia-induced molecular changes affecting glioma biology and therapy.
http://doras.dcu.ie/4509/
Marked
Mark
Strategies for the Elimination of Matrix Effects in the LC-MS/MS Analysis of the Lipophilic Toxins Okadaic Acid and Azaspiracid-1 in Molluscan Shellfish
(2010)
Kilcoyne, Jane; Fux, Elie
Strategies for the Elimination of Matrix Effects in the LC-MS/MS Analysis of the Lipophilic Toxins Okadaic Acid and Azaspiracid-1 in Molluscan Shellfish
(2010)
Kilcoyne, Jane; Fux, Elie
Abstract:
Considerable efforts are being made worldwide to replace in vivo assays with instrumental methods of analysis for the monitoring of marine biotoxins in shellfish. Analysis of these compounds by the preferred technique of LC-MS/MS is challenged by matrix effects associated with shellfish tissue components. In methods validation, assessment of matrix interferences is imperative to ensure the accuracy of analytical results. We evaluated matrix interferences in the analysis of okadaic acid (OA) and azaspiracid 1 (AZA1) in mollucscan shellfish by using a conventional acidic method on electrospray triple stage quadrapole (TSQ) and hybrid quadrupole time of flight (QToF) instruments, with matrix matched standards for several species. Using the acidic method, we found no matrix interferences for OA, and matrix suppression for AZA1, with the TSQ instrument; in contrast, we found matrix enhancement for OA, and no matrix interference for AZA1, with QToF. The suppression of AZA1 signal on t...
http://arrow.dit.ie/scschcpsart/14
Marked
Mark
Title
(1998)
Ryan, Fergus; Devaney, D; Joyce, Caroline; Nestorowicz, A; Permutt, M; Glaser, Benjamin...
Title
(1998)
Ryan, Fergus; Devaney, D; Joyce, Caroline; Nestorowicz, A; Permutt, M; Glaser, Benjamin; Thornton, Paul; Barton, David E
Abstract:
Persistent hypoglycaemia in infancy is most commonly caused by hyperinsulinism. A case is reported of the somatic loss of the maternal 11p in an insulin secreting focal adenoma in association with a germline SUR-1mutation on the paternal allele in a baby boy with hyperinsulinism diagnosed at 49 days old. A reduction to homozygosity of an SUR-1 mutation is proposed as a critical part of the cause of focal hyperinsulinism.
http://arrow.dit.ie/scschbioart/9
Marked
Mark
Identification of fatty acid oxidation disorder patients with lowered acyl-CoA thioesterase activity in human skin fibroblasts
(2005)
Hunt, Mary; Ruiter, Jos; Mooyer, Petra; van Roermond, Carlo W T; Ofman, Rob; Ijlst, Lod...
Identification of fatty acid oxidation disorder patients with lowered acyl-CoA thioesterase activity in human skin fibroblasts
(2005)
Hunt, Mary; Ruiter, Jos; Mooyer, Petra; van Roermond, Carlo W T; Ofman, Rob; Ijlst, Lodewig; Wanders, Ronald J A
Abstract:
Background: Acyl-CoA thioesterases are enzymes that hydrolyze acyl-CoAs to the free fatty acid and coenzyme A (CoASH). These enzymes have been identified in several cellular compartments and are thought to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. However, to date no patients deficient in acyl-CoA thioesterases have been identified. Design: Acyl-CoA thioesterase activity was measured in human skin fibroblasts. Western blot analysis was used to determine Type-II acyl-CoA thioesterase protein levels in patients. Results: Activity was found in human fibroblasts with all saturated acyl-CoAs from C4:0- to C18:0-CoA, with highest activity detected with lauroyl-CoA and myristoyl-CoA (C12:0 and C14:0-CoA). An antibody that recognizes all isoforms of Type-II acyl-CoA thioesterases, precipitated the majority of acyl-CoA thioesterase activity in fibroblasts, showing that the major activity in fibroblasts is catalyzed by Type-II thioesterases. Measurement of acyl-C...
http://arrow.dit.ie/scschbioart/8
Marked
Mark
The Peroxisome Proliferator-Activated Receptor Alpha (PPAR ) regulates Bile Acid Biosynthesis.
(2000)
Hunt, Mary; Yang, Yi-Zeng; Eggertsen, Gosta; Carneheim, Claes; Gafvels, Mats; Einarsson...
The Peroxisome Proliferator-Activated Receptor Alpha (PPAR ) regulates Bile Acid Biosynthesis.
(2000)
Hunt, Mary; Yang, Yi-Zeng; Eggertsen, Gosta; Carneheim, Claes; Gafvels, Mats; Einarsson, Curt; Alexson, Stefan
Abstract:
Fibrates are a group of hypolipidemic agents which efficiently lower serum triglyceride levels by affecting the expression of many genes involved in lipid metabolism. These effects are exerted via the peroxisome proliferator-activated receptor alpha (PPARa). In addition, fibrates also lower serum cholesterol levels, suggesting a possible link between the PPARa and cholesterol metabolism. Bile acid formation represents an important pathway for elimination of cholesterol, and the sterol 12a-hydroxylase is a branch-point enzyme in the bile acid biosynthetic pathway, which determines the ratio of cholic acid to chenodeoxycholic acid. Treatment of mice for one week with the peroxisome proliferator WY-14,643 or fasting for 24 hours both induced the sterol 12a- hydroxylase mRNA in liver. Using the PPARa knockout mouse model, we show that the induction by both treatments was dependent on the PPARa. A reporter plasmid containing a putative peroxisome proliferator-response element (PPRE) iden...
http://arrow.dit.ie/scschbioart/7
Marked
Mark
A revised nomenclature for mammalian acyl-CoA thioesterases/hydrolases
(2005)
Hunt, Mary; Yamada, Junji; Maltais, Lois; Wright, Mathew; Podesta, Ernesto; Alexson, St...
A revised nomenclature for mammalian acyl-CoA thioesterases/hydrolases
(2005)
Hunt, Mary; Yamada, Junji; Maltais, Lois; Wright, Mathew; Podesta, Ernesto; Alexson, Stefan
Abstract:
Acyl-CoA thioesterases, also known as acyl-CoA hydrolases, are a group of enzymes that hydrolyze CoA esters such as acyl-CoAs (saturated, unsaturated, branched chain), bile acid-CoAs, CoA esters of prostaglandins etc, to the corresponding free acid and coenzyme A. There is however significant confusion regarding the nomenclature of these genes. In agreement with the HUGO Gene Nomenclature Committee (HGNC) and the Mouse Genomic Nomenclature Committee (MGNC), a revised nomenclature for mammalian acyl-CoA thioesterases/hydrolases has been suggested for the 12 member family. The family root symbol is ACOT, with human genes named ACOT1-12, and rat and mouse named Acot1-12. Several of the ACOT genes are the result of splicing events and these splice variants are catalogued.
http://arrow.dit.ie/scschbioart/6
Marked
Mark
A peroxisomal acyltransferase in mouse identifies a novel pathway for taurine conjugation of fatty acids.
(2007)
Reilly, Sarah-Jayne; O'Shea, Eithne; James, O'Byrne; Alexson, Stefan; Hunt, Mary
A peroxisomal acyltransferase in mouse identifies a novel pathway for taurine conjugation of fatty acids.
(2007)
Reilly, Sarah-Jayne; O'Shea, Eithne; James, O'Byrne; Alexson, Stefan; Hunt, Mary
Abstract:
A wide variety of endogenous carboxylic acids and xenobiotics are conjugated with amino acids, before excretion in urine or bile. The conjugation of carboxylic acids and bile acids with taurine and glycine has been widely characterized and de-novo synthesized bile acids are conjugated to either glycine or taurine in peroxisomes. Peroxisomes are also involved in the oxidation of several other lipid molecules, such as very long chain acyl-CoAs, branched chain acyl-CoAs and prostaglandins. In this study we have now identified a novel peroxisomal enzyme called acyl-CoA:amino acid N-acyltransferase (ACNAT1). Recombinantly expressed ACNAT1 acts as an acyltransferase that efficiently conjugates very long-chain and long-chain fatty acids to taurine. The enzyme shows no conjugating activity with glycine, showing that it is a specific taurine conjugator. Acnat1 is mainly expressed in liver and kidney and the gene is localized in a gene cluster, together with two further acyltransferases, one ...
http://arrow.dit.ie/scschbioart/13
Displaying Results 76 - 100 of 614 on page 4 of 25
1
2
3
4
5
6
7
8
9
10
Bibtex
CSV
EndNote
RefWorks
RIS
XML
Item Type
Book chapter (15)
Conference item (52)
Doctoral thesis (67)
Journal article (440)
Master thesis (research) (6)
Master thesis (taught) (10)
Report (1)
Review (7)
Working paper (4)
Other (12)
Institution
Dublin City University (63)
NUI Galway (22)
NUI Maynooth (227)
Trinity College Dublin (162)
University College Cork (4)
University College Dublin (13)
University of Limerick (1)
Dublin Institute of Technology (122)
Peer Review Status
Peer reviewed (518)
Non peer reviewed (89)
Unknown (7)
Year
2012 (19)
2011 (75)
2010 (75)
2009 (60)
2008 (49)
2007 (56)
2006 (66)
2005 (57)
2004 (65)
2003 (17)
2002 (17)
2001 (11)
2000 (13)
1999 (5)
1998 (6)
1997 (3)
1996 (3)
1995 (7)
1994 (2)
1992 (5)
1990 (1)
1988 (1)
1981 (1)
built by Enovation Solutions